科研项目

正在开展的项目

课题负责人, 医学影像信息学 (MIRI)
课题负责人, 医疗信息系统的体系集成 (SoSiHe)
课题负责人, 医学影像的平行计算 (PCMI)
课题负责人, 生物系统的传输现象建模以及热疗应用 (MBBS)
课题负责人, 光学影像断层技术与分析系统 (OITA)
课题负责人, 肿瘤尺度分析和大小测试 (SATVM)
课题负责人, 解剖学拓扑机构展示系统 (SAAT)
课题负责人, 纳米医学和生物纳米医学影像 (NMNI)
课题负责人, 知识计算机辅助乳腺影像系统 (KCBI)
课题负责人, 三位数字乳腺断层技术和分子乳腺影像技术 (MBI)
课题负责人, 航天医学影像学 (IISM) （2010-）
课题负责人, 医学影像信息学教学系统 (MIIE)
课题负责人, 医学影像信息知识库系统 (MIIS)

完成的科研项目

医学研究

课题负责人, 远距离医学影像显示软件系统 (dMID), 课题参加者: Tao He, Xiaosen Jiang (2007)
课题负责人, 各向异性扩散医学影像增强, 课题参加者: Yongqiang Zhao (2007)
课题负责人, CT影像局部重建, 课题参加者: Junjun Deng, Ge Wang, Lihe Wang (sponsored by NIH, 2006-07)
课题负责人, 肿瘤体视测量系统，课题参加者: Dr. Ge Wang, Dr. Simon Kao, and Lili Huang (2002-03)

分布式计算/网格计算

课题参加者, development of Compact Muon Solenoid (CMS) Physics Grid Tier-2 Center; this project is funded by University of Iowa Research Vice President for Research, project members: Boyd Knosp, and Shaowen Wang (project leader) (2002-04)

课题负责人, Build Linux cluster for parallel computing using recycled PCs and building a distributed peer-to-peer system for internet computing using Mac with MacOSX, team members: Edward Tao He, James Hunsaker, and John Zhang (2003-05)

课题参加者, establish and develop a Grid Research and educatiOn@ioWa (GROW) group that provides research services and leadership at The University of Iowa for conducting research, education, and outreach on Grid computing Shaowen Wang (project leader) (2003-05)

课题负责人, Java-enhanced client-server distributed computing systems for Grid computing; the system called H3S system, project members: Edward He and Lili Huang (2003-05)

课题参加者, 基于GlobusToolkit TM的网格科学计算, team member (2003-05)

课题负责人, 基于网格计算的医学影像学 (2004-06)

课题副负责人，,纳米结构和材料特性预测的平行计算， project members: Dr. Shaoping Xiao, Dr. Shaowen Wang, and Wenyi Hou (2004-06)

软件研发

课题负责人, Stereological volume measurement of cancer/tumor size for radiologists; this project is funded by Department of Radiology, College of Medicine, project members: Dr. Ge Wang, Dr. Simon Kao, and Lili Huang (2002-03)

课题负责人, Stereotactic Atlas of the Macaca Mulatta Thalamus and Adjacent Basal Ganglia Nuclei, with Drs. I. A. Ilinsky, K. K. Ilinsky, and Boyd Knosp, Department of Anatomy, College of Medicine, University of Iowa (2001)

数据可视化和计算机图像

课题负责人, 3-D visualization and animation of genetic data for disease, with Dr. V. Vieland and Dr. Mark Logue, Genetics Research Center, Department of Biostatistics, College of Public Health, University of Iowa (2001-03)

课题负责人, 3-D visualization and animation of mesh-free and unstructured grids in soil mechanical systems, with Dr. J. S. Chen, Department of Mechanical Engineering, College of Engineering, University of Iowa (2000-01)

高级咨询员, 2-D visualization of equiaxed crystal growth over the melt flow, with Dr. C. Beckermann, Department of Mechanical Engineering, College of Engineering, University of Iowa (1999-00)

高级咨询员, 2-D visualization and animation of shock wave propagation in vehicle airbag, work with Dr. Barry Butler, Department of Mechanical Engineering, College of Engineering, University of Iowa (1996-97)

计算流体力学

课题负责人, Multi-phase, multi-component based CFD modeling and simulations for dam breaking and river flooding in environmental study (2006)

课题负责人, Lattice Boltzmann simulation of fluid in a grid computing environment; this project is funded by University of Iowa Internal Funding Program/Mathematical and Physical Sciences (MPSFP)

课题参加者: Dr. Chinlong Lin, Dr. John Zhang and Tao He (2003-05)

生物信息学

课题参加者, parallelism of long and short sequence comparison and protein similarity study (2006-2007)

课题副负责人, Software development in genetic linkage (2005)

课题参加者 , HPC algorithms in bioinformatics, including DNA/RNA sequencing, searching, and mapping, genetic linkage software development (2003-05)

虚拟实现

课题参加者, Developed visual reality applications using OpenGL and Cave library, participated in project of "Tele-immersive visualization of the environment," worked with Judy Brown and Marc Armstrong, founded by NASA No. COE/97-0104 (1998-99)

统计分析

课题参加者: Parallel Implementation of Model of Response Accuracy and Response Time in Computerized Testing, University of Iowa, (2007)

课题参加者, Multi-variables regression of statistical data from NYSE, Department of Finance, College of Business, University of Iowa, (1999-00)

高级咨询员, Statistical simulation of Iowa Test Basic Skill (ITBS), Department of Education, College of Education, (2000)

超级计算

课题负责人, Intel-Microsoft-UI collaborative project, a HPC System dual-operated by Window Compute Cluster system configuration, sponsored by Intel and Microsoft, project members: Tao He, Richard Libby (Intel), Brain Hammond (Microsoft), Michael Zebrowski (X-ISS) (2006-2007)

课题负责人, High performance computing and grid computing in modeling and simulations of transport phenomena during nano-structured materials processing (2005-2006)
Technical Leader

课题负责人 , exploration of grid comptuing technology for scientific research such as various grid architectures and systems, project members: Boyd Knosp, and Shaowen Wang (2001-02)
Team Member, Participated in NSF project in "teaching parallel computing in parallel programming education," worked with Judy Brown and Dr. Ted Rus (PI), founded by NSF 9551183 (1997-98)

地理科学

高级咨询员, Sedimentation by dripping instability in viscous fluids in geophysical system, with Dr. G.W. Bergantz (PI), Department of Geological Science, University of Washington, Seattle, under award of NSF EAR-9508291 (1995-96)

材料科学

课题参加者, new algorithms and numerical methods of HPC in simulation of transport phenomena during the processing of nano-structured materials and/or biomaterials, project members: Dr. Shaoping Xiao (project leader) and Dr. Ned Brown. (2003-04)

课题参加者, developing a continuum model for transport phenomena during solidification of metal alloys; several important issues between two-phase model and continuum model of solidification have been clarified and model has been implemented into CFD programming for simulation. The study was financially supported by Department of Energy under DE-FG02-87ER13579, worked with Dr. Frank Incropera ( PI), Purdue University, West Lafayette, IN (1993-94)

课题参加者, Developed a two-phase CFD code to simulate sedimentation of dendritic crystals, solidification of a binary copper-aluminum alloy, supported by NSF CBT 8808888, and CTS-8957149, NASA, and ALCOA Technical Center, worked with Dr. C. Beckermann (PI), University of Iowa (1992-93)

课题参加者, Participated in research of solidification in metal alloys, and develop two-phase model of transport phenomena during solidification. The double convective and diffusive effects in dendritic crystal sedimentation, coupling between micro-macroscopic phenomena. The project was financially supported by NSF CBT 8808888 and CTS-8957149, NASA NCC3-289, and ALCOA Technical Center, worked with Dr. C. Beckermann (PI), University of Iowa (1987-92)

声理生理科学

课题参加者, CFD study of unsteady flow in larynx of human glottal system, project was supported by NIDCD DC0083101A2, with Dr. Fari Alipour (PI), University of Iowa (1992-93)

数据库理论和实现

课题负责人, International digital library for CT image analysis (7 international institutions and 11 departments), project members: Dr. Ge Wang, and Lili Huang (2002)

课题负责人, Research and development in data structure and database system applied to system of business and management in petroleum industrial, Jun Ni, PI, Department of Power Machinery Engineering, Shanghai Jiao University, funded by Da-Gang Petrologic Industrials, with Y. Xia and J. Zhang, (1985-86)

工程流体力学

课题参加者, Research and development in fluid couplings or torque converters used for marine and energy saving systems in mine industry, textile industry, and marine prolusion systems, with Prof. Z. Ying, and Prof. S.W. Zhu, Department of Power Machinery Engineering, Shanghai Jiao University (1984-85)

大学计算服务

课题负责人, support University of Iowa campus-wide HPC-related scientific and research computing. The project has several sub-projects, including providing services of scientific computing to campus researchers, coordinating HPC workshops, and helping faculty to apply for external grants. (2003-06)

课题负责人， High performance computing and parallel computing; CT image processing in radiology; biomedical organ modeling; quantum mechanics and computational chemistry; bioscience, thermal science, geographical data visualization; image mapping, research data visualization, graphics using OpenGL (1996-01)

Off-site HPC technical liaison/or off-site consultant between University of Iowa and National Center for Supercompuing Applications (NCSA), Cornell Theory Center (CTC) at Cornell University (Smart Node Program member), San Diego Supercomputing Center (SDSC), and Pittsburgh Supercomputing Center (PSC) (1994-00)

潜力性启动项目

Emergent Scientific Modeling and Petascale Computing Implementations for the Simulations of Biotransport Phenomena in Nano-biophysical Systems
Ontological Data Mapping and Domain Modeling in Medical Imaging Informatics
Renovation of Core Facilities to Establish Managed Campus Research Data Center
Multiscale Modeling of Biotransports in Nanothermo/Chemo-radiation Therapies
Parallelism of Cone-Beam Katsevich Image Reconstruction on GPU Clusters with OpenCL
Acquisition of a High-end, Multi-core Supercomputer for Medical Imaging and Medical Informatics
Multiscale Modeling and Parallel Simulation of Nanotube-reinforced Polymer Composites
HPC-enabled multi-scale modeling and simulation of nanotube-based devices
Establish a Compact Muon Solenoid Grid-based Tier-2 heavy Ion Nuclear Physics Computing Center and Cyberinfrastructure
Multi-scale Modeling and Simulations of Biotransport Phenomena in Complex Biophysics Systems Using Petascale Computing and Medical Imaging
Medical Imaging and HPC based Multi-scale Model and Simulation of Biotransport in Biological and Physiological Systems
HPC-enabled multiscale modeling and simulation of nanotube-based devices
Multi-scale Modeling and Simulations of Biotransport Phenomena in Complex Biophysics Systems Using Petascale Computing and Medical Imaging
Cyber-enabled, Adaptive Computation Model for Simulation of Biotransport Phenomena using Computational Thinking
Adaptive Projection Regrouping and Grid Reformation for CT Image Reconstruction
Adaptive Hybrid Diffusion Model for Vessel Image Enhancement
Multiparametric MRI-based Computer Assistant System for Breast Cancer Diagnosis
HPC-Powered Models of Response Accuracy and Response Time in Computerized Testing
Simulation of Multiscale Nanocomposites Using Parallel Computing
Acquisition of Cloud Computing based HPC Resources for Across-Disciplinary Research and Education
HPC-based Bridging Domain Multiscale Method with the Implementation of Nano-Middleware
Synthesis and Modeling of Organic Bottlebrush Polymers with Hollow Cavities and Their Integration with Inorganic Nanomaterials
International Digital Libraries for CT-Image Analysis
Gravitational Effects on Nucleation and Crystal Growth of Mono-dispersed Particles during Biomaterials Processing